ERROR: DomainError with -4.404019e7:
sqrt was called with a negative real argument but will only return a complex result if called with a complex argument. Try sqrt(Complex(x)).
Stacktrace:
[1] throw_complex_domainerror(f::Symbol, x::Float32)
@ Base.Math ./math.jl:33
[2] sqrt
@ ./math.jl:686 [inlined]
[3] _broadcast_getindex_evalf
@ ./broadcast.jl:709 [inlined]
[4] _broadcast_getindex
@ ./broadcast.jl:682 [inlined]
[5] _getindex
@ ./broadcast.jl:706 [inlined]
[6] _getindex
@ ./broadcast.jl:705 [inlined]
[7] _broadcast_getindex
@ ./broadcast.jl:681 [inlined]
[8] _getindex
@ ./broadcast.jl:706 [inlined]
[9] _broadcast_getindex
@ ./broadcast.jl:681 [inlined]
[10] getindex
@ ./broadcast.jl:636 [inlined]
[11] macro expansion
@ ./broadcast.jl:1004 [inlined]
[12] macro expansion
@ ./simdloop.jl:77 [inlined]
[13] copyto!
@ ./broadcast.jl:1003 [inlined]
[14] copyto!
@ ./broadcast.jl:956 [inlined]
[15] copy
@ ./broadcast.jl:928 [inlined]
[16] materialize
@ ./broadcast.jl:903 [inlined]
[17] get_approx_p_from_r(assoc_r::Vector{Float32}, dof::Int64)
@ OmiGA /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/MOLQTL.jl:894
[18] cis_permutation_one_assoc!(permutation_method::String, gene_i::Int64, exppheno::Vector{Float32}, QQt::Matrix{Float32}, cis_genotype::Matrix{Float32}, absr_perm::Vector{Float32}, _df_perm:😃ataFrames.DataFrame, _df_tops:😃ataFrames.DataFrame, df_full:😃ataFrames.DataFrame, dof::Int64; y_perms::Matrix{Float32}, y_perms_res::Nothing, is_sample_byrow::Bool, fdr::Float32)
@ OmiGA /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/Permutation.jl:25
[19] macro expansion
@ /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/QTL_cis.jl:877 [inlined]
[20] macro expansion
@ /online1/zhangz_group/zhangz/.julia/packages/TimerOutputs/6KVfH/src/TimerOutput.jl:237 [inlined]
[21] macro expansion
@ /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/QTL_cis.jl:874 [inlined]
[22] macro expansion
@ /online1/zhangz_group/zhangz/.julia/packages/TimerOutputs/6KVfH/src/TimerOutput.jl:237 [inlined]
[23] macro expansion
@ /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/Utils.jl:238 [inlined]
[24] runOmiGA_cis(struct_PHENO:😮miGA.Phenotype{Float32}, _struct_GENO:😮miGA.Genotype{Int8}, _struct_KIN:😮miGA.Kinship{Float32}, _struct_COVAR:😮miGA.Covariates{Float32}, _struct_PRIOR_HerB::Nothing; _struct_DOM::Nothing, _struct_ITERM::Nothing)
@ OmiGA /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/QTL_cis.jl:859
[25] real_main()
@ OmiGA /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/OmiGA.jl:380
[26] julia_main()
@ OmiGA /online1/zhangz_group/zhangz/USER/tengjy/OmiGA_v1.0/released/OmiGA-build-v1.0.2.250322_beta/OmiGA/src/OmiGA.jl:117
[27] top-level scope
@ none:1
: